Elites are a challenging combat encounter with greater perils and greater rewards. All Elite encounters begin a difficult battle with a hostile ship, and defeating them will always result in both a card reward (with increased chances for Uncommon and Rare cards) and a choice of 3 artifacts (2 on Harder+) after the battle. Elite encounters vary by zone, as shown below. A given Elite can only be encountered at an Elite node once per zone, and map generation will ensure you cannot encounter more Elites than the zone has.
Zone 1: Lazuli Nebula
Name
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Details
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The Humble Approach
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A large bounty-hunting ship loaded with cannons, but with one glaring weak point
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Fireball¹
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A small pirate ship piloted by a familiar face that turns up the heat with each shot
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Needler
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A medium sized-ship that automatically fires back when attacked, intentional or not
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¹Can be encountered up to two times-- once via the normal Elite map node and once via the Fake Distress Signal event
Zone 2: Sapphire Cluster
Name
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Details
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Crystalline Offshoot
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Scattered remnants of an earlier fight, returned to battle with quickly scaling damage
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Rogue Starnacle
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An aggressive ship-sized creature hides amongst the asteroid detritus it produces
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Zone 3: Void's Cradle
Name
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Details
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Rusting Colossus
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A dilapidated old wreck rusting itself apart... but perhaps not quickly enough
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Buried(?) Relic
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Relic from an ancient era that might contain riches as long as it doesn't wake back up
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